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Christine Steinseifer-Jeske
Coordination

Oili Tsakmakis
Administration

Room W3 1-138

Phone.: +49 (0)441 - 798 3648/49

Office hours:
Tuesday 13:00 - 14:00
Thursday 10:00 - 12:00 
and by appointment

New: Online office hour on thursdays from 10:00-11:00, by appointment

Introduction to Next Generation Sequencing (NGS)

OLTECH PhD study programme Neurosensory Science & Systems PhD study programme Environmental Sciences and Biodiversity PhD programme Medicine and Health Sciences

Online workshop via BBB/Stud.IP Meetings

Next Generation Sequencing technologies have recently revolutionised biological sciences. This workshop will provide students with an introduction to bioinformatic approaches to handle and analyse NGS datasets. The following topics will be treated:

Day 1: UNIX/Linux and Perl for Bioinformatics
Day 2: Introduction to NGS: Platforms, File formats, Quality control and preprocessing, alignments
Day 3: NGS toolkits, evaluation of alignments, mapping statistics, alignment visualisation

The course consists of lectures and accompanying practical exercises.

Technical requirenments:
For access to the Universities HPC Cluster, Windows user need MobaXterm and Linux/Mac user can log on via the ssh terminal. Additionally, you need R and a texteditor like notepad++ or emacs.

Registration: StudIP (Course-Nr. 50.01.010)

Participants: max. 15

Credit Points: 2 KP

Modules: olt203, olt327, olt403, olt707

Start Time

21. September 2020, 09:00 – End date: 23. September 2020, 17:00

Location

W01 0-008 (Rechnerraum)

Wet6bmaster (olzugtech@uol.de) (Changed: 2020-05-19)